Suppose that you want to submit a
protein that contains two chains, named A and B. Then you have four
possibilities to obtain an energy profile:
1.- To fill
the chain information box with the next
sequence of characters:
AB
With this
information, the profile will be performed on chain A, but
considering all the atom contacts with the chain B.
2.- To fill the chain information box with
the next sequence of characters:
BA
With this information, the profile will be performed on chain B,
but considering all the atom contacts with the chain A.
3.- To fill the chain information
box with the next sequence of characters:
A
With this information, the profile will
be performed only on chain A, without considering the atoms of
chain B, even if you submit the atom coordinates of this chain.
4.- To fill the chain
information box with the next sequence of characters:
B
With this information, the profile will
be performed only on chain B, without considering the atoms of
chain A, even if you submit the atom coordinates
of this chain.
If you are
submitting a unique protein chain with identifier, you must write it in the chain
information box.
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