Genome Explore

Search Potential TAGs in a Genome

This item allows to extract the potential SAGE TAGs from the entire or regions of a genome.
Step 1Organism
Step 2Anchoring-Tagging Enzyme Pair
Step 3Odds ratio for confidence class assignments
Step 4TAG categories and genomic mapping contexts to display:
TAG Class
Genomic Type
TAG Confidence
TAG Location
Internal Poly-A next ?
  •  Platinum
  •  Gold
  •  Silver
  •  Aluminum
  •  Copper
  •  Iron
  •  Silicon
  •  All
  •  Known Protein
  •  Hypothetical Protein
  •  rRNA
  •  snoRNA
  •  snRNA
  •  smRNA
  •  tRNA
  •  Intergenic A
  •  Intergenic B
  •  Intergenic C
  •  High
  •  Low
  •  Undefined
  •  ORF
  •  3'UTR
  •  5'UTR
  •  Exon
  •  Intron
  •  Yes
  •  No
Step 5Explore SAGE TAGs in the genome by:
  •  Gene Name
  •  Genome Fragment
  •  Chromosome
  •  Full Genome
Step 6Input Data
Upload text file
OR Fill in Gene name list
Output Display Options
Show Sort by
  Pontificia Universidad Católica de Chile  |  MBL  |  Terms of Use
  ©2007 SAGExplore. All rights reserved.