Genome Mapping

Map your TAGs within a Genome

This section allows to find TAGs within a Genome.
Step 1Organism
Step 2Anchoring-Tagging Enzyme Pair
Step 3Odds ratio for confidence class assignments
Step 4TAG categories and genomic mapping contexts to display:
TAG Class
Genomic Type
TAG Confidence
TAG Location
Internal Poly-A next ?
  •  Platinum
  •  Gold
  •  Silver
  •  Aluminum
  •  Copper
  •  Iron
  •  Silicon
  •  All
  •  Known Protein
  •  Hypothetical Protein
  •  rRNA
  •  snoRNA
  •  snRNA
  •  smRNA
  •  tRNA
  •  Intergenic A
  •  Intergenic B
  •  Intergenic C
  •  High
  •  Low
  •  Undefined
  •  ORF
  •  3'UTR
  •  5'UTR
  •  Exon
  •  Intron
  •  Yes
  •  No
Step 5Input Data
Upload text file
OR Fill in TAG list
Example of valid input data:

CATGAAAAAAAAAA  101   50  300 TAG000123
CATGAAAAAATGAA   34    0 1000 TAG001098
CATGAAAAAATGAA  976  289    7 TAG000049
...
For more details about the input format, follow this link.
Output Display Options
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