Ignacio Ibarra Del Río

Ignacio Ibarra Del Río
Biochemist
Phone: +56 (2) 354-1918
Email: ibarra.ignacio@gmail.com (ibarra NULL.ignacio null@null gmail NULL.com)

Research project: Development of a reliable DNA comparative three-dimensional modeling with a particular focus in protein-DNA modeling.

Selected publications:

1)    Ibarra, I. L., & Melo, F. (2010). Interactive software tool to comprehend the calculation of optimal sequence alignments with dynamic programming, 26(13), 1664–1665. doi:10.1093/bioinformatics/btq252

Selected talks and posters:

1)    Interactive software tool to comprehend the calculation of optimal sequence alignments with dynamic programming. Talk given at the 1st International Conference on Bioinformatics SoIBio, September, 2010,
2)    Comparative Modeling of B-DNA. Poster presented at the ISCB-Latin America 2012 Conference on Bioinformatics, Santiago, Chile, March 2012.
3) Comparative three-dimensional structure modeling of protein-DNA complexes with MODELLER: application to the prediction of transcription factor DNA binding specificity. Poster presented at the XII PABMB Congress, Puerto Varas, Chile, October 2013
4) Performance analysis of a comparative protein-DNA structure modeling pipeline with MODELLER versus a standard protocol with 3DNA. Poster presented at the A2B2C Argentinian Conference on Bioinformatics and Computational Biology, Bariloche, Argentina, September 2014.