NOTE: All the software available here comes unsupported and with no warranties.
A program to assess the quality of a three – dimensional protein structure. It uses a statistical potential at the atomic level and gives an energy profile as ouput.
Details: ReadMe (http://protein NULL.bio NULL.puc NULL.cl/cardex/servers/anolea/index NULL.html)
Download binary: Linux 2.4.2-2 (http://protein NULL.bio NULL.puc NULL.cl/cardex/software/anolea/anolea_bin NULL.tar NULL.gz)
Authors: Melo, F., Feytmans, E.
This software calculates a consensus melting temperature (Tm) for any given short DNA sequence (16-30 nts) using a merged method that is based on three different thermodynamic tables.
StAR is a software that computes ROC curves and several related statistics to assess the significance of their differences in performance.
SAT (Sequence Alignment Teacher) is a software to teach about sequence alignment methods based on dynamic programming such as Smith – Waterman (Local) and Needleman – Wunsch (Global).
Download binary: Download page
Authors: Ibarra, I and Melo, F.